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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015813097.1_cds_XP_016497408.1_11535
CDS Infomation

[gene=LOC107816225] [db_xref=GeneID:107816225] [protein=haloalkane dehalogenase-like] [protein_id=XP_016497408.1] [location=complement(join(4102..4188,4419..4571,5234..5389,5503..5580,6019..6099,6368..6435,6542..6598,6874..6943,7332..7401,7559..7659,7800..7855,7990..8044,8141..8302))] [gbkey=CDS]
Sequence

ATGGCTACTCTTCACTGTCACTGCTTCCGCATGCTCCCCTCTTCTCCCCCTGATAGGATC
AATCTGCCACTTCACCAATTCTCTCTTCCAAAATACCATGGAGCTCAGGGAAGGAAGAAA
CTTTTGCGATTCCGTTGCCGATCGAGCAGCGATAACAACGACGAGTATTTGCTGGATGCT
CCTGTTTCAGTTGGGGACGGATTTTCTTTTAGCGGAGGAAAATATTCAGACGAGCCGAGC
CCCGCTGATGAATGGTTCAAGAAAGGAAAATTTGTGAAAGCTCATCCTGTATCTGGGACT
GGGGAGAAGGCAAAAGATCCTCTTTTTGGACTTACAATGGGTGGGGGTTCACAGGCCTCA
ACTGATCTTTTCAGATGGTTTTGTGTAGAGAGCGGAAGCACTGACAATTCTACCATTGTA
TTAGTCCACGGATTACCCTCACAGGCATACTCTTACCGCAAAATTCTTCCCATTCTTGAG
AAGAACTATCATGCTATAGCATTTGATTGGCTGGGATTTGGATTCTCAGATAAGCCCCAA
CCAAGATACGGATTTGACTACACATTGGATGAGTATGTGGCATCCTTGGAATCTATTCTC
AATGCTCTTACTGACAAAAAGGTTACTCTTGTAGTACAGGGATACTTTTCACCAATTGCG
ATCAAATATGCTAGCAATCACCAGGAAAAGCTAAACGGTCTTATACTTCTCAATCCACCA
CTGACAATGCAACATGCCGATCTACCATCAACCTTATCAGTCCTGAGCAACTTTTTGTTG
GGCGAAATATTTTGTCAGGACCCTCTTAGAGCTAGTGATAAAACAATGCTGAGTTGTGGT
CCTTACCAAATAAAAGAAGATGTGGCGATGGTTTACAGAAGACCTTATCTCACATCTGGT
TCTGCAGGATTTGCATTAAATGCAATAAGCAAGGCAATGAAGAAGCAACTGAAGGGCTAT
GTTGAGGACTCAAGAGCAATACTTATGGACAATAACTGGACAGTCCAAACAACAGTTTGC
TGGGGACAAAGAGACCGCTGGTTAAGCTTTGATGGTGTAGAAGATTTCTGCAAAGAGTCA
AAGCATCGGTTGGTTGAACTTCCTATGTCAGGACATCACGTTCAGGAGGACAGTGGTGAA
GAATTAGGTCAACTCATTGCTGGAATTGTTGGAAAAAGAAGCAGCATTTTGTGA

Peptide Sequence

PEP ID

XP_016497408.1
PEP Infomation

PREDICTED: haloalkane dehalogenase-like [Nicotiana tabacum]
Sequence

MATLHCHCFRMLPSSPPDRINLPLHQFSLPKYHGAQGRKKLLRFRCRSSSDNNDEYLLDA
PVSVGDGFSFSGGKYSDEPSPADEWFKKGKFVKAHPVSGTGEKAKDPLFGLTMGGGSQAS
TDLFRWFCVESGSTDNSTIVLVHGLPSQAYSYRKILPILEKNYHAIAFDWLGFGFSDKPQ
PRYGFDYTLDEYVASLESILNALTDKKVTLVVQGYFSPIAIKYASNHQEKLNGLILLNPP
LTMQHADLPSTLSVLSNFLLGEIFCQDPLRASDKTMLSCGPYQIKEDVAMVYRRPYLTSG
SAGFALNAISKAMKKQLKGYVEDSRAILMDNNWTVQTTVCWGQRDRWLSFDGVEDFCKES
KHRLVELPMSGHHVQEDSGEELGQLIAGIVGKRSSIL

Transcript Sequence

Gene sequence data has not been registered.